AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RPS7PG

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
AACTCTG HEPTAMER 7 nt CCCCAAAGGGCCCGGGTTCATTA spacer · 23 nt CTCAAGACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
AACTCTGCCCCAAAGGGCCCGGGTTCATTACTCAAGACA

Find similar RSS

Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV13-25ZB*03_i0ctctg_c2g_c3g_a5c_8-tta11_c20t_c22t_t23g_t25c_c26t_30agaga34_c40a_g43a_g48c_a49c_g52t_a55-_g56-_g57-_a61c_t62c_t66c_68actca72_a76g_c78g_a80g_a82g_t83g_t84a_g86c_a106g_a108c_a111c_t112a_a113g_t116c_g117a_t118g_c120-_t121g_g122a_t124a_a133g_a140g_149------------------t167_g169c_a193c_g194c_c195a_g200a_t205c_207----210_t212a_c213t_t216c_g220a_g222c_c223a_g229t_t231a_g232a_c236a_a239g_t247c_c248t_g251a_a253t_c257g_c258t_g259c_a262c_c263a_267tctgcag273_a275c_c276t_g278a_281tgggctt287_a289t_g290c_g291a_293catg296_g298c_t300a_g301a_a302g_t304c_t307g_t310g_t312-_c313-_a314-_t317g_g318a_g322c_c324g_a325t_c327t_a328g_g329t_a331c_c332a_335ggacacagccctgctgcctgcctggccctcacgccccctccctccccaccctggtta391 RHESUS IGL MUSA RHESUS-VDPPS5ETH
IGLV13-25ZB*03_i0ctctg_c2g_c3g_a5c_8-tta11_c20t_c22t_t23g_t25c_c26t_30agaga34_c40a_g43a_g48c_a49c_g52t_a55-_g56-_g57-_a61c_t62c_t66c_68actca72_a76g_c78g_a80g_a82g_t83g_t84a_g86c_a106g_a108c_a111c_t112a_a113g_t116c_g117a_t118g_c120-_t121g_g122a_t124a_a133g_a140g_149------------------t167_g169c_a193c_g194c_c195a_g200a_t205c_207----210_t212a_c213t_t216c_g220a_g222c_c223a_g229t_t231a_g232a_c236a_a239g_t247c_g251a_a253t_c257g_c258t_g259c_a262c_c263a_267tctgcag273_a275c_c276t_g278a_281tgggctt287_a289t_g290c_g291a_293catg296_g298c_t300a_g301a_a302g_t304c_t307g_t310g_t312-_c313-_a314-_t317g_g318a_g322c_c324g_a325t_c327t_a328g_g329t_a331c_c332a_335ggacacagccctgctgcctgcctggccctcacgccccctccctccccaccctggtta391 RHESUS IGL MUSA RHESUS-VWA2VAYLP