AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RQCZPV

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT MUSA
CACAGTG HEPTAMER 7 nt TTACACACCCAA spacer · 12 nt ACATAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGTTACACACCCAAACATAAACC

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Alleles with this RSS variant

12 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-20*01 RHESUS IGK IMGT MUSA RHESUS-VI7MLB43I
IGKV1-18*01 RHESUS IGK IMGT MUSA RHESUS-VEQK5F6U7
IGKV1-38*01 RHESUS IGK IMGT MUSA RHESUS-VTH72X5LH
IGKV1-2I6R*08 RHESUS IGK MUSA RHESUS-VVQ6PIC6H
IGKV1-2NCM*10_t6c_a39t_g45a RHESUS IGK MUSA RHESUS-VHAEJ6FLO
IGKV1-2NCM*10_t6c_g45a RHESUS IGK MUSA RHESUS-VCJNNSDON
IGKV1-7OW5*01_a167c_a197g RHESUS IGK MUSA RHESUS-VHYQCGQHV
IGKV1-7OW5*01_a50t_t207c_c231t_t258a_c279t RHESUS IGK MUSA RHESUS-VKRPQOMG6
IGKV1-7OW5*01_t207c_c279t RHESUS IGK MUSA RHESUS-V7WZZZPY4
IGKV1-7OW5*01_t207c_t258a RHESUS IGK MUSA RHESUS-VMLBJJUWX
IGKV1-7OW5*01_t258a_c279t_c286t RHESUS IGK MUSA RHESUS-VXIJPP3HC
IGKV1-VM5J*01_t42a_c53g_t69c_a75g_a110g_t125a_t147c_a193t_t207c_a255g_t258a RHESUS IGK MUSA RHESUS-VUKTJBXWV