AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RSCKAE

SpeciesRHESUS
Type3'D-RS · complete signal, 3' of D (28 nt)
Sources IMGT MUSA
CACAGTG HEPTAMER 7 nt ACACAGCCCCAT spacer · 12 nt TCCCAAAGC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGACACAGCCCCATTCCCAAAGC

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD2-21*01 RHESUS IGH IMGT MUSA RHESUS-DO3UA3SQG
IGHD2-21*02 RHESUS IGH IMGT MUSA RHESUS-D27GQUBFF
IGHD2-39*01 RHESUS IGH IMGT MUSA RHESUS-DDZDAVWOJ
IGHD2-2*01 RHESUS IGH IMGT MUSA RHESUS-DGFXZKZFE
IGHD2-14*02_S1717 RHESUS IGH MUSA RHESUS-DVEFHTFXU