AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RSH56D

SpeciesRHESUS
Type5'D-RS · complete signal, 5' of D (28 nt)
Sources MUSA
TGATTGTTG NONAMER 9 nt ATTTACATTTCT spacer · 12 nt TACAGCA HEPTAMER 7 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
TGATTGTTGATTTACATTTCTTACAGCA

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Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD4-ZLQB*01_i0cctggatatt_t1g_a6t_a11c_13gacg16 RHESUS IGH MUSA RHESUS-DFA7K5YA4
IGHD4-ZLQB*01_i0cctggatttt_t1g_a6t_a11c_13gaca16 RHESUS IGH MUSA RHESUS-DXGGIOLSN
IGHD6-UTCO*01_i0cct_g3a_a7t_c9a_g11c_c12t_a14c_16atcagacg23 RHESUS IGH MUSA RHESUS-DR6RWGP3G