AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RT5RFS

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt CTCCAGGCCAGTGGGGAACTGAG spacer · 23 nt ACAAGAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCAGGCCAGTGGGGAACTGAGACAAGAACC

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Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV18-FO3T*01 RHESUS IGL MUSA RHESUS-VMHA2CJYL
IGLV18-FO3T*01_g15a_g21a_c38a_c39t_c57a_a109t_g110a_g133c_g144a_c154-_t155-_c156-_167gtgcc171_t201c_g204t_a207g_t219c_t220c_a244c_t252c_t262a_c264g_g268a_c275a_a284g_a286c_g290a_a291g_t294c_g314a_g316a RHESUS IGL MUSA RHESUS-V22GAXAXO
IGLV18-FO3T*06_g15a_g21a_c38a_c39t_c57a_a109t_g110a_g133c_g144a_c154-_t155-_c156-_167gtgcc171_t201c_g204t_a207g_t219c_t220c_a244c_t252c_t262a_c264g_g268a_c275a_a284g_a286c_g290a_a291g_t294c_t300g RHESUS IGL MUSA RHESUS-VLRISX7AZ