AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RTHDXY

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACATTG HEPTAMER 7 nt AGGGAACATCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACATTGAGGGAACATCAGTGTGAGCCCAGACACAAACC

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Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV0-7776*01 RHESUS IGH MUSA RHESUS-VCKFCUYWU
IGHV12-7776*01_t38a_c55g_t59c_g145a_g147c_t150g_a187g_t233c_g248t_c257t_g288t_t307c RHESUS IGH MUSA RHESUS-VZZGNPCQF
IGHV12-7776*01_t38a_c55g_t59c_g197a_g248t RHESUS IGH MUSA RHESUS-VFNQ65TAQ