AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RXD2NS

SpeciesRHESUS
Type3'D-RS · complete signal, 3' of D (27 nt)
Sources MUSA
CCCATGG HEPTAMER 7 nt TCTTTTGCGGG spacer · 11 nt GCTGGAATC NONAMER 9 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
CCCATGGTCTTTTGCGGGGCTGGAATC

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD3-72Z4*01_i0gtggctttttcaaattcccgtt_t4g_c7g_t10a_g11t_g15c_t19g_t20c_t23g_a24t_c25g_c27g_29aga31 RHESUS IGH MUSA RHESUS-DJFZ3W5LE
IGHD3-72Z4*02_i0gtggctttttc_g1a_t2a_a6c_t8c_a9g_g11t_g17a_t19-_t22a_29gggcatgtgagcaga43 RHESUS IGH MUSA RHESUS-DK3IH6A7T