AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS RHESUS-RXDERD

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT MUSA
CACAGTG HEPTAMER 7 nt GTACAGCCCCGA spacer · 12 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGGTACAGCCCCGAACACAAACC

Find similar RSS

Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-68*01 RHESUS IGK IMGT RHESUS-VMS5KNLYR
IGKV2-2PRM*09_i0ct_g4a_t5a_t8-_g12t_c16-_a17g_t19a_c20a_t21a_c25t_t26g_t28a_c29g_c30t_32ataga36_c39t_41tagagatcatc51_g54t_c166g_t313a_g314t_g319a_c327a_t329a_t333- RHESUS IGK MUSA RHESUS-V2XDXASZH
IGKV2-LJI67 RHESUS IGK MUSA RHESUS-V4ZCWWAHV
IGKV2S2*01 RHESUS IGK MUSA RHESUS-VAFDE3RMV
IGKV2-54DC*02_g30c RHESUS IGK MUSA RHESUS-VC4CGWYFK
IGKV2-54DC*03 RHESUS IGK MUSA RHESUS-VTILR6ZCY
IGKV2S3*01 RHESUS IGK MUSA RHESUS-V64VRLR2R
IGKV2-54DC*05_327gctccct333 RHESUS IGK MUSA RHESUS-VV754GWNQ