AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RXHFEI

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACGGTG HEPTAMER 7 nt CTCCAGGCCAAGGGGGAACTGAG spacer · 23 nt ACAAGAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACGGTGCTCCAGGCCAAGGGGGAACTGAGACAAGAACC

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Alleles with this RSS variant

4 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV18-FO3T*06_g144a_c154t_t219c_t220c_c255t_t262a_g268a_a279g RHESUS IGL MUSA RHESUS-VN5P4WFGL
IGLV1-6*01 RHESUS IGL MUSA RHESUS-VH3EDBQ5T
IGLV18-SRE7*02_c38a_c84t_a200g_t219c_t220c_c221t_c229a_a258c_g259a_g275c_c300t_t313g_c314a_g326a_c336t RHESUS IGL MUSA RHESUS-VXJ4IJQB4
IGLV18-SRE7*02_t313g_c314a_c336t RHESUS IGL MUSA RHESUS-VKGZAUYT7