AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RXJ4CB

SpeciesRHESUS
Type3'D-RS · complete signal, 3' of D (28 nt)
Sources MUSA
CACAGGT HEPTAMER 7 nt TGGAGCGCAATG spacer · 12 nt GCACAATCA NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGGTTGGAGCGCAATGGCACAATCA

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD1-C7RJ*01_c1a_t2g_a4g_c5a_g7a_10ctgtcttg17 RHESUS IGH MUSA RHESUS-DBWUF7XTS
IGHD6-UTCO*01_g1a_g3a_t4g_c9g_a10c_g11t_14cttg17 RHESUS IGH MUSA RHESUS-DQGYHQVIF