AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RYOM3N

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
AACCAAG HEPTAMER 7 nt TGACGGGAAGTCAGTGTGAGACA spacer · 23 nt AGACAAAAT NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
AACCAAGTGACGGGAAGTCAGTGTGAGACAAGACAAAAT

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-2UXX*04_g1a_2ctta5_c7t_c10t_g12c_g13a_g16a_a17t_c20a_23tgtcc27_g31c_g32a_t34c_37tcat40_g49a_c53t_c55t_a58c_g59a_g68a_g107a_g112t_c114a_c118a_a119g_c120g_g123a_g128a_c134t_g141a_g146a_g151a_g153t_g156a_g159a_c161t_t164a_g165t_t169a_t171a_g175a_a194t_a197g_c201t_g205c_g211c_a221g_c222t_c223a_t226c_c231t_a232g_c234a_g241t_c248t_a250g_a256t_262-------------------280_288-----292_c294a_c296t_t307c_g315t_a316t RHESUS IGH MUSA RHESUS-VX7NKMCFH