AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RYRVOD

SpeciesRHESUS
Type3'D-RS · complete signal, 3' of D (27 nt)
Sources MUSA
AAAAGTG HEPTAMER 7 nt ATTCAAGAGGA spacer · 11 nt TAGGAAAGC NONAMER 9 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
AAAAGTGATTCAAGAGGATAGGAAAGC

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD12-7HR7*01_t2c_t5-_g6a_g9a_t10a_a15t_a18t_t19g_23tctccacattattggg38 RHESUS IGH MUSA RHESUS-DCWKXQAB7
IGHD12-7HR7*01_t2c_t5a_g7a_g9a_g11-_a15t_a18t_t19g_23tctccacattattggg38 RHESUS IGH MUSA RHESUS-DJCN32MR2