AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RYUDKT

SpeciesRHESUS
Type5'D-RS · complete signal, 5' of D (27 nt)
Sources MUSA
GGATCAGGT NONAMER 9 nt TAATGTTACCC spacer · 11 nt CACTGTG HEPTAMER 7 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
GGATCAGGTTAATGTTACCCCACTGTG

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Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD1-C7RJ*01_i0aagtgggct_c1g_a4c_g8a_g9t_11ggc13 RHESUS IGH MUSA RHESUS-DQD34S36K
IGHD1-RIPD*05_i0aagtg_3ctgt6_t9a_g10t_a13t_c14g_a16g RHESUS IGH MUSA RHESUS-DULXZYSFC