AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS SHEEP-R5QMIF

SpeciesSHEEP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTCTGGAAGCACCTGCTGTCTGT spacer · 23 nt CCCCAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCTGGAAGCACCTGCTGTCTGTCCCCAAACC

Find similar RSS

Alleles with this RSS variant

10 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV25-1*01 SHEEP TRA IMGT SHEEP-VIIT7WPGI
TRAV25-13*01 SHEEP TRA IMGT SHEEP-V5RQ54TAB
TRAV25-18*01 SHEEP TRA IMGT SHEEP-VUAA675QL
TRAV25-2*01 SHEEP TRA IMGT SHEEP-VY5OXJZSA
TRAV25-22*01 SHEEP TRA IMGT SHEEP-VP4XKVPKX
TRAV25-26*02 SHEEP TRA IMGT SHEEP-VEJCEW4K2
TRAV25-3*01 SHEEP TRA IMGT SHEEP-VHUEOSJSZ
TRAV25-5*01 SHEEP TRA IMGT SHEEP-VC3EZWQTX
TRAV25-6*01 SHEEP TRA IMGT SHEEP-VLOU4FQRI
TRAV25-8*01 SHEEP TRA IMGT SHEEP-VK2GKUF5S