AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS SHEEP-RF47AM

SpeciesSHEEP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CCTGAAGTAATGAGAAAAGCTGT spacer · 23 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCCTGAAGTAATGAGAAAAGCTGTACAAAAACC

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Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRDV1-21*01 SHEEP TRD IMGT SHEEP-VROHG3ISM
TRDV1-5*01 SHEEP TRD IMGT SHEEP-VI5P35CM5
TRDV1-5*02 SHEEP TRD IMGT SHEEP-VUTY2FU5L
TRDV1-5*03 SHEEP TRD IMGT SHEEP-VO57LOPDT
TRDV1-6*01 SHEEP TRD IMGT SHEEP-VU2Y3PY2T