AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS SHEEP-RM5VC5

SpeciesSHEEP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAATG HEPTAMER 7 nt GTTCAAGTTCATGGGGAAGTGAG spacer · 23 nt GCCAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAATGGTTCAAGTTCATGGGGAAGTGAGGCCAAAACC

Find similar RSS

Alleles with this RSS variant

10 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV2-10*01 SHEEP IGL IMGT SHEEP-VPNGKSNMQ
IGLV2-11*01 SHEEP IGL IMGT SHEEP-VKUHJOZDW
IGLV2-12*01 SHEEP IGL IMGT SHEEP-VDSFTI5SP
IGLV2-13*01 SHEEP IGL IMGT SHEEP-VY7QLXKUF
IGLV2-15*01 SHEEP IGL IMGT SHEEP-VDRBC3WW3
IGLV2-17*01 SHEEP IGL IMGT SHEEP-VIYH2ZIQF
IGLV2-18*01 SHEEP IGL IMGT SHEEP-VOYPCTU6E
IGLV2-19*01 SHEEP IGL IMGT SHEEP-VXRU4J6H5
IGLV2-21*02 SHEEP IGL IMGT SHEEP-VNSWO6N3E
IGLV2-21*03 SHEEP IGL IMGT SHEEP-V4WRWSC5X