AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS SHEEP-RMKIUR

SpeciesSHEEP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGCC HEPTAMER 7 nt CTGCATGATCAGGTGCCTCTGGG spacer · 23 nt ACAAAAACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGCCCTGCATGATCAGGTGCCTCTGGGACAAAAACA

Find similar RSS

Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRBV5-10*01 SHEEP TRB IMGT SHEEP-VPEZVI3FK
TRBV5-12*01 SHEEP TRB IMGT SHEEP-VKA3XV2RT
TRBV5-13*01 SHEEP TRB IMGT SHEEP-VMRIYJL7W
TRBV5-15*01 SHEEP TRB IMGT SHEEP-VCPTK37RQ
TRBV5-25*01 SHEEP TRB IMGT SHEEP-VXABO24GR
TRBV5-29*01 SHEEP TRB IMGT SHEEP-VKAVXE2E2
TRBV5-5*01 SHEEP TRB IMGT SHEEP-V3Q7XG2XN
TRBV5-8*01 SHEEP TRB IMGT SHEEP-VHPWZQ7E2