AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS SHEEP-RSHQBP

SpeciesSHEEP
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt CTTCCCAGGCATCTTCTGTCTGT spacer · 23 nt ACTCAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTTCCCAGGCATCTTCTGTCTGTACTCAAACC

Find similar RSS

Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV13-1*01 SHEEP TRA IMGT SHEEP-VQ6KXEEQZ
TRAV13-10*01 SHEEP TRA IMGT SHEEP-V6CO2JO5K
TRAV13-14*01 SHEEP TRA IMGT SHEEP-VJK3PCFDV
TRAV13-15*01 SHEEP TRA IMGT SHEEP-VY2P2U3BI
TRAV13-2*01 SHEEP TRA IMGT SHEEP-VHSMLACEV
TRAV13-5*01 SHEEP TRA IMGT SHEEP-VDE7V7MN4