AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS TROUT-RDR3WK

SpeciesTROUT
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ATACAAACCAGCACAAGAGCTGT spacer · 23 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGATACAAACCAGCACAAGAGCTGTACAAAAACC

Find similar RSS

Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV6-35*01 TROUT IGH IMGT TROUT-VODHFJ5AJ
IGHV6D-40*01 TROUT IGH IMGT TROUT-VTYAHEG4N
IGHV6D-76*01 TROUT IGH IMGT TROUT-VHSXPEGW3