AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS TROUT-RLL2AF

SpeciesTROUT
TypeV-RS · complete signal, 3' of V (38 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ACACAGGAGGCTGCAGCGCTGT spacer · 22 nt GCATAAACT NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CACAGTGACACAGGAGGCTGCAGCGCTGTGCATAAACT

Find similar RSS

Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1D-15*01 TROUT IGH IMGT TROUT-VWOKI5SXW
IGHV1D-4*01 TROUT IGH IMGT TROUT-VL75N5PHE