AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS TROUT-ROB6EU

SpeciesTROUT
TypeV-RS · complete signal, 3' of V (30 nt)
Sources IMGT
GTGAATG HEPTAMER 7 nt TGTGGTGGATCTGT spacer · 14 nt ACAAAATCC NONAMER 9 nt
Heptamer Spacer (14 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

30 nt
GTGAATGTGTGGTGGATCTGTACAAAATCC

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Alleles with this RSS variant

4 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV15D-27-3*01 TROUT IGH IMGT TROUT-VYWD2YGRA
IGHV15D-49*01 TROUT IGH IMGT TROUT-V5IZBA7WW
IGHV15D-53*01 TROUT IGH IMGT TROUT-V6OJ446IK
IGHV15D-69*01 TROUT IGH IMGT TROUT-V7JHDK2VJ