AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ZEBRAFISH-R7IEV3

SpeciesZEBRAFISH
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CCCAGTG HEPTAMER 7 nt ATACAAAATGCCTGAGAGGCTTT spacer · 23 nt ACAAAAACT NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CCCAGTGATACAAAATGCCTGAGAGGCTTTACAAAAACT

Find similar RSS

Alleles with this RSS variant

4 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV25-2*01 ZEBRAFISH TRA IMGT ZEBRAFISH-VYU4THEBX
TRAV25-3*02 ZEBRAFISH TRA IMGT ZEBRAFISH-VPGP7MCFO
TRAV25-3*03 ZEBRAFISH TRA IMGT ZEBRAFISH-VBPBVAXBQ
TRAV35-1*01 ZEBRAFISH TRA IMGT ZEBRAFISH-VVV5ROOFN