AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ZEBRAFISH-RQL5EH

SpeciesZEBRAFISH
TypeV-RS · complete signal, 3' of V (38 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ACAGGAAACACAACAACACTGA spacer · 22 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CACAGTGACAGGAAACACAACAACACTGAACAAAAACC

Find similar RSS

Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRAV18-4*01 ZEBRAFISH TRA IMGT ZEBRAFISH-VER2B2TEB
TRAV18-5*01 ZEBRAFISH TRA IMGT ZEBRAFISH-V4ZITSNTN
TRAV18-6*01 ZEBRAFISH TRA IMGT ZEBRAFISH-VAJXYFCAH
TRAV18-9*01 ZEBRAFISH TRA IMGT ZEBRAFISH-VXD56S2A4
TRAV18-9*02 ZEBRAFISH TRA IMGT ZEBRAFISH-VHCJYP6X5
TRAV18-9*03 ZEBRAFISH TRA IMGT ZEBRAFISH-VPU7PUJ43