AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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CAMEL-VBDDSAIAZ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesCamelus dromedarius LocusIGK TypeV FunctionalTrue Length304 nt

IGKV4-4*01: a Camelus dromedarius IGK V allele sequence, 304 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesCamelus dromedarius (NCBITAXON:9838)
Locus / typeIGK / V
Functional iTrue
Length304 nt
Protein UID iCAMEL-VP-6OGXRJ (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

304 nt
GACATCGTGATGACCCAGTCTCCCAGCTCCGTGACTGCGTCTGCAGGAGAGAAGGTCACCATCAATTGTAAGTCCAGCCAGAGTGTGTTATACAGCTCCAACCAGAAAAGCTACTTAGCTTGGTACCAGCAGAGACCTGGACAGTCTCCTAGGCTGCTCATCTACTATGCGTCCACCCGGGAATCGGGGGTCCCTGATCGATTCAGCGGCAGTGGGTCCACAACAGATTTCACTCTCACGATCAGCAGCTTCCAGCCTGAAGACGCGGCAGTGTATTACTGCCAGCAGGCTTATAGTGCTCCCT

Amino-acid sequence (V-REGION)

101 aa
DIVMTQSPSSVTASAGEKVTINCKSSQSVLYSSNQKSYLAWYQQRPGQSPRLLIYYASTRESGVPDRFSGSGSTTDFTLTISSFQPEDAAVYYCQQAYSAP

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (CAMEL-VBDDSAIAZ). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV4-4*01 IMGT IMGT

External records i

IMGT: IGKV4-4*01

Literature references 1 total · 1 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
33180672 Hiding in plain sight: structure and sequence analysis reveals the importance of the antibody DE loop for antibody-antigen binding. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGATTCAGCCTCAAACAAAAACC IMGT CAMEL-RWTACN

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGGGCCACAGCCACGCCTGCTCACCTTCCTGATGCTCTGGGTCTCAGGTGTCTCTGGG 49 + 11 nt IMGT CAMEL-LGGWOB

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/CAMEL-VBDDSAIAZ/similar?min_identity=0.95&kind=nt.