AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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CAT-VIDAD67PO

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesFelis catus LocusIGL TypeV FunctionalNone Length321 nt

IGLV5-75*01: a Felis catus IGL V allele sequence, 321 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesFelis catus (NCBITAXON:9685)
Locus / typeIGL / V
Functional iNone
Length321 nt
Protein UID iCAT-VP-JBNQEZ (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

321 nt
CAGCTTGTAATGACTCAGCCACCCTCCATGTCTGCAAACCTGGGATCATCAGCCAGACTCACGTGCACCCTGAGCAGTGGCTTCAGTGTTGGCAGCTATTCTATAACTTGGTTCCAGCAGAAGCCAGGGAGCCCTCCCTGGTATCTCCTGTAGTTCTTCTCAGACTCAAATAAATACCAGGGCTCTGTGGTCCCCAGCCAATTCTCTGGATCCAAAGATGCCTCGGCCAATGCAGGAATTCTGCTCATCTCTGGGCTGCAGCCTGAGGACGAGACTATTACTGTGCTGCAGCTCGTGACAGTGGGAGCAGCTACCGTTACT

Amino-acid sequence (V-REGION)

107 aa
QLVMTQPPSMSANLGSSARLTCTLSSGFSVGSYSITWFQQKPGSPPWYLL*FFSDSNKYQGSVVPSQFSGSKDASANAGILLISGLQPEDETITVLQLVTVGAATVT

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (CAT-VIDAD67PO). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV5-75*01 IMGT IMGT

External records i

IMGT: IGLV5-75*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGTCTCAGACAATGAGGAAGTGAGACAAAAACT IMGT CAT-RRRQJ2

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGCCTGGACTCCAGTCCTCCTCTTGCTCCTCTGTCAGGGCACAGGTTCCCTGACC 46 + 11 nt IMGT CAT-LGEXHX

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/CAT-VIDAD67PO/similar?min_identity=0.95&kind=nt.