AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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CAT-VJLTK7GGJ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesFelis catus LocusIGL TypeV FunctionalNone Length282 nt

IGLV3-8-1*01: a Felis catus IGL V allele sequence, 282 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesFelis catus (NCBITAXON:9685)
Locus / typeIGL / V
Functional iNone
Length282 nt
Protein UID iCAT-VP-C7QE7T (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

282 nt
TCCAGCATGCTGACTCAGCTAGCCTTGTTGTCAGAGGCCCCGGGACAGATGGCCATGACCACCTCTCAGGGAGACAATGTAGAAACCTTTGGTGTTCAGTGATACCAGCAGAAGCCAGGACAGACTCCTGTGCTGGTCATATATGACAATAACAAGCCTCCCTCAGGGATTCCTGACTGATACTCGGGCTCCAACTTCAAAGACACAGACACCCTAAGCATCAGCAGGACCAGAGTCGAGGACGAGGCCGACTATCAGGTGTGAAACAGTGGTAGACATGCT

Amino-acid sequence (V-REGION)

94 aa
SSMLTQLALLSEAPGQMAMTTSQGDNVETFGVQ*YQQKPGQTPVLVIYDNNKPPSGIPD*YSGSNFKDTDTLSISRTRVEDEADYQV*NSGRHA

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (CAT-VJLTK7GGJ). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV3-8-1*01 IMGT IMGT

External records i

IMGT: IGLV3-8-1*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGACAAAGGCAGACAGGAAAGTGAGACACAAACT IMGT CAT-RHAFXC

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/CAT-VJLTK7GGJ/similar?min_identity=0.95&kind=nt.