CAT-VRVYLJCKJ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesFelis catus LocusIGL TypeV FunctionalNone Length319 nt

IGLV5-38*01: a Felis catus IGL V allele sequence, 319 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Felis catus (NCBITAXON:9685)
Locus / type	IGL / V
Functional i	None
Length	319 nt
Protein UID i	CAT-VP-XCDOKD (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

319 nt

CAGTCTGTGCTGACCCAGCCGCCCTCCCTGTCTGCCTCTCTGGGAATGACAGCCAGACTCACCTGCACCCTGAGCAGTGGCTTTGATGTTAATGCTGTATCCTGGTTCCAGCAGAAGCCAGGGAGCCCTCCCCAGTATCTCCTGTACTACTACTCAGACTCAATTAAGGAGTTAGTATCTGAAGCCCCCCGCCGCTTCTCTGGATCCAAAGATGCCTCGGCCAAGGCAGGGCTTCTGCTCCTCTCCGGGCCGCAGCCTGGGGACGAGGCTGACTATTACTGTGCTACAGCTCATGGCAGTGGGAGCGGCTTTCATTAGT

Amino-acid sequence (V-REGION)

106 aa

QSVLTQPPSLSASLGMTARLTCTLSSGFDVNAVSWFQQKPGSPPQYLLYYYSDSIKELVSEAPRRFSGSKDASAKAGLLLLSGPQPGDEADYYCATAHGSGSGFH*

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (CAT-VRVYLJCKJ). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGLV5-38*01	IMGT	IMGT

External records i

IMGT: IGLV5-38*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGCGTCTCAGATAAGGAGGATGTGAGGCAAAAACT	IMGT	CAT-RZSVU2

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGCCTGAACTCCTGTCCTCCTCGCGCTCCTCTCTCAATGCACATTTCCCTGTCC	46 + 10 nt	IMGT	CAT-L2AFRT

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/CAT-VRVYLJCKJ/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases