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CAT-VWEF6GBVK

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesFelis catus LocusTRA TypeV FunctionalNone Length289 nt

TRAV14-4*01: a Felis catus TRA V allele sequence, 289 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesFelis catus (NCBITAXON:9685)
Locus / typeTRA / V
Functional iNone
Length289 nt
Protein UID iCAT-VP-EU5LCK (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

289 nt
TCTCGAAGGGGAACCAGGGCCCCACCAGCAGTGTTAGTGGCAGGACAAGGGGGCTGTCATCCTGGAATGCACCATATGCCCAGTGATCTTAAGTTTATAGTCTGTTGTGATACAAGCAGCCCATCAGATGGGGAGAGATTTTCCTTATTCTCAGGATTCTAAAATGAACAAAACGCCAAACAGAAGGTTGCACTCATGCATGTCCAGAAGAAGAGAGAATCCACCATCTTGCCATCTCAGCTTCAGAGCTAGGAACTCCCCAGGTATTGCTCGCACGGACAAGTCTACA

Amino-acid sequence (V-REGION)

96 aa
SRRGTRAPPAVLVAGQGGCHPGMHHMPSDLKFIVCCDTSSPSDGERFSLFSGF*NEQNAKQKVALMHVQKKRESTILPSQLQS*ELPRYCSHGQVY

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (CAT-VWEF6GBVK). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAV14-4*01 IMGT IMGT

External records i

IMGT: TRAV14-4*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGAGTGGAAGATCTCAAACATGCTTACTGTCTAGCCTTCGAAGGTGGTCAAGATTCCAATATTG 52 + 13 nt IMGT CAT-LQF3VW

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/CAT-VWEF6GBVK/similar?min_identity=0.95&kind=nt.