COW-JLKSL4EZR
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
TRGJ1-1*01, TRGJ2-1*01: a Bos taurus TRG J allele sequence, 60 nt, functional. The nucleotide sequence is below, with every recorded name and its source.
| Species | Bos taurus (NCBITAXON:9913) |
|---|---|
| Locus / type | TRG / J |
| Functional i | True |
| Length | 60 nt |
Coding sequence (nt)
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (COW-JLKSL4EZR). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: TRGJ1-1*01, TRGJ2-1*01. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| TRGJ1-1*01 | IMGT | IMGT |
| TRGJ2-1*01 | IMGT | IMGT |
External records i
IMGT: TRGJ1-1*01
Contributed by IMGT. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| j_rs | GATTATTGT | IMGT | COW-RQK7WR |
| j_rs | GATTATTGTAGGAGCTTTTACCATTGTG | IMGT | COW-RSQHQ3 |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/COW-JLKSL4EZR/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases