AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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COW-V6BYWGSIO

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesBos taurus LocusTRB TypeV FunctionalNone Length286 nt

TRBV10*01: a Bos taurus TRB V allele sequence, 286 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesBos taurus (NCBITAXON:9913)
Locus / typeTRB / V
Functional iNone
Length286 nt
Protein UID iCOW-VP-Q422ZC (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

286 nt
GAGGCCAGGATAGACAAGATACAAGATACGAGATCACAGTGACAGGAGAGACAATGACTCTGGAATGTCACCAGACTGATAACCATGACTATATGTACTGGTACCAACAAGACCTGGGACACAGGCTGAGGCTGACCCATTATACCTATGATGTTGACAACACTGAGAAAGTTGAAATCTCCAACAGGTACAGCATCTCGAGATCAAATACAGAGGATTTCTACCTGACCCCGAAGTCTGTTATCCCCTCCCACACATCCATGTACTCCTGTGCCAGCAGTAAGTC

Amino-acid sequence (V-REGION)

94 aa
GQDRQDTRYEITVTGETMTLECHQTDNHDYMYWYQQDLGHRLRLTHYTYDVDNTEKVEISNRYSISRSNTEDFYLTPKSVIPSHTSMYSCASSK

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (COW-V6BYWGSIO). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRBV10*01 IMGT IMGT

External records i

IMGT: TRBV10*01

Literature references 2 total · 2 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
38762584 Invariant γδTCR natural killer-like effector T cells in the naked mole-rat. name mentioned* literature_supp
41941497 Pigs lacking Natural Killer T cells have altered cellular responses to influenza. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsTATAGTGCTGCATGGCCACTTCCTCTCTGCACAGAAGGG IMGT COW-RCVDUK

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/COW-V6BYWGSIO/similar?min_identity=0.95&kind=nt.