COW-VM4EJSSTQ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesBos taurus LocusTRD TypeV FunctionalTrue Length293 nt

TRDV1-16*01: a Bos taurus TRD V allele sequence, 293 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Bos taurus (NCBITAXON:9913)
Locus / type	TRD / V
Functional i	True
Length	293 nt
Protein UID i	COW-VP-I2QWFW (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

293 nt

GCCCAGAAAGTTACTCAAGACCAGCCAGTCATAATCAGTCAAGTGGGGAAGGTAGCCACCCTTAACTGTCAGTATGAAACAAGTAGGAACGTGCATGTCTACTGCATTTTTTGGTACAAGCAGCTTCCCAGTGGAGAGATGACTTACCTCATCCGTCAGTATTCAGAAGATGGGAATGAAAGGGACGGCCGCTACTCTGTAAACTTCCAGAAAGCAAGTAAATCCATCAGCCTTACTATTTCATTCTTAAAACCAGAACATTCTGCAAAGTATTTCTGTGCTCTCTGGGAACT

Amino-acid sequence (V-REGION)

97 aa

AQKVTQDQPVIISQVGKVATLNCQYETSRNVHVYCIFWYKQLPSGEMTYLIRQYSEDGNERDGRYSVNFQKASKSISLTISFLKPEHSAKYFCALWE

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (COW-VM4EJSSTQ). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
TRDV1-16*01	IMGT	IMGT

External records i

IMGT: TRDV1-16*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGTTTGAAGTAATAGGAAAAGCTGAACAAAAACC	IMGT	COW-R4MKZG

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGCCGCTCTCCAGCCTGCACTGGGTGTTCCTGGCCTTTACCTTCTCTGGATCTGGTGTG	49 + 11 nt	IMGT	COW-L4I5RC

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/COW-VM4EJSSTQ/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases