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COW-VNWNXLD5J

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2013-01-20 SpeciesBos taurus LocusTRG TypeV FunctionalNone Length276 nt RecordSuperseded

a Bos taurus TRG V allele sequence, 276 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. TRGV5-2*03 is still published by IMGT as COW-V4XXNSRUY, 282 nt, which contains this sequence. This is the earlier record (276 nt, current in IMGT releases 2013-01-20). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesBos taurus (NCBITAXON:9913)
Locus / typeTRG / V
Functional iNone
Length276 nt
Protein UID iCOW-VP-CUL2L5 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

276 nt
TCTTCCAACTTGATGTTAATCACTAGTAATACTGGGGAGACTGCTTCGTTCCCTTGTGATCTTACACAAGGGGCCACCTATATCCACTTGTACAAACATGAGGAGGGGATGGCCCCCCGACGTCTTTTATACTACGACAGCTACAACTCAAAGACTGTGCTTGAATCAGGAATCAGTGGAACAAAATACCATGTCTATAAGGGCACAGGGAGGAGCTATACATTTACAATCGTAAATCTGCAAGCAAGTGATTCCGGCATATACTACTGTGCTATC

Amino-acid sequence (V-REGION)

92 aa
SSNLMLITSNTGETASFPCDLTQGATYIHLYKHEEGMAPRRLLYYDSYNSKTVLESGISGTKYHVYKGTGRSYTFTIVNLQASDSGIYYCAI

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2013-01-20; formerly TRGV5-2*03 (to 2013-01-20); superseded by TRGV5-2*03 (282 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
TRGV5-2*032013-01-20

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/COW-VNWNXLD5J/similar?min_identity=0.95&kind=nt.