CYNO-VX2BVQSPS

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca fascicularis LocusTRB TypeV FunctionalTrue Length286 nt

TRBV5-10*01: a Macaca fascicularis TRB V allele sequence, 286 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Macaca fascicularis (NCBITAXON:9541)
Locus / type	TRB / V
Functional i	True
Length	286 nt
Protein UID i	CYNO-VP-QH7KOV (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

286 nt

GACGCTGGAGTCGTCCAAAGTCCCACGCACCTGATCAAAACGAGAGGACAGCAAGTGACTCTGAGATGCTCTCCTATCTCTGGGCACAACACTGTGTACTGGTACCAACAGGCACTCGGTCAGGGGCCCCAGTTGATATTTCAGTATTATCGGGGGGAAGACAGAGGCAGAGGAAACTTCCCTGATCGATTCTCAGGTCACCAGTTCCCTAACTATAGCTCTGAGCTGAATGTGAACGCCTCGGAGATGGGGGACTCGGCCCTGTATCTCTGTGCCAGCAGCTTGG

Amino-acid sequence (V-REGION)

95 aa

DAGVVQSPTHLIKTRGQQVTLRCSPISGHNTVYWYQQALGQGPQLIFQYYRGEDRGRGNFPDRFSGHQFPNYSSELNVNASEMGDSALYLCASSL

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (CYNO-VX2BVQSPS). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
TRBV5-10*01	IMGT	IMGT

External records i

IMGT: TRBV5-10*01

Literature references 1 total · 1 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMID	Title	Evidence	Source
36096729	Identification and characterization of the T cell receptor (TCR) repertoire of the cynomolgus macaque (Macaca Fascicularis).	sequence in paper	literature_supp

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGCCTGGCAGAGTCACTGACATTCTGTATATAAACT	IMGT	CYNO-R2JPMT

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGGCCCCGGGCTCCTCTGCTGGGCGCTGCTCTGTCTCCTGGGAGCAGGCCCAGTG	49 + 8 nt	IMGT	CYNO-LY4M6U

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/CYNO-VX2BVQSPS/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases