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DOG-V4IXRB2X2

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesCanis lupus LocusTRA TypeV FunctionalNone Length281 nt

TRAV20*01: a Canis lupus TRA V allele sequence, 281 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesCanis lupus (NCBITAXON:9612)
Locus / typeTRA / V
Functional iNone
Length281 nt
Protein UID iDOG-VP-YPNH6L (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

281 nt
GAAGACTGGGTGGAGCAGAGTCCTCAGACCTTGAGACTTCAGGAGGGAGACAGTGTCAGCCTCAACTGCAGTTACACAGTCAGTGCCTTCAAAGGGCTCCAGTGGTACAGACAGGATCCTGGGCAAAGCCCTGAAGTCCTCTTCCTTCTGTATTCAGTTAGTGATGAAATGTAGAAAAAAAGTCAAGAAGGGAAGTTCTCTCTGCATATTGATACCTCTGCACCTGAAGACTCAGTGCTCCCAGGCACACCTAGCCTGTGCCAAAACCCTGCAGTTGCGCT

Amino-acid sequence (V-REGION)

93 aa
EDWVEQSPQTLRLQEGDSVSLNCSYTVSAFKGLQWYRQDPGQSPEVLFLLYSVSDEM*KKSQEGKFSLHIDTSAPEDSVLPGTPSLCQNPAVA

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (DOG-V4IXRB2X2). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAV20*01 IMGT IMGT

External records i

IMGT: TRAV20*01

Literature references 15 total · 15 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
22792299 Unbiased analysis of TCRα/β chains at the single-cell level in human CD8+ T-cell subsets. name mentioned* literature_supp
30152754 Human T cell receptor occurrence patterns encode immune history, genetic background, and receptor specificity. name mentioned* literature_supp
31237075 Comparative analysis of CDR3 regions in paired human αβ CD8 T cells. name mentioned* literature_supp
36408799 SARS-CoV-2-specific CD4+ and CD8+ T cell responses can originate from cross-reactive CMV-specific T cells. name mentioned* literature_supp
36603583 Improved predictions of antigen presentation and TCR recognition with MixMHCpred2.2 and PRIME2.0 reveal potent SARS-CoV-2 CD8+ T-cell epitopes. name mentioned* literature_supp
36923729 Cross-reactivity influences changes in human influenza A virus and Epstein Barr virus specific CD8 memory T cell receptor alpha and beta repertoires between young and old. name mentioned* literature_supp
37287989 Targeting KRASG12V mutations with HLA class II-restricted TCR for the immunotherapy in solid tumors. name mentioned* literature_supp
38649520 Single-cell T-cell receptor repertoire profiling in dogs. name mentioned* literature_supp
38762584 Invariant γδTCR natural killer-like effector T cells in the naked mole-rat. name mentioned* literature_supp
38871688 Germline-like TCR-α chains shared between autoreactive T cells in blood and pancreas. name mentioned* literature_supp
38954022 Identification and validation of tumor-specific T cell receptors from tumor infiltrating lymphocytes using tumor organoid co-cultures. name mentioned* literature_supp
39421738 scRNA+TCR-seq reveals the pivotal role of dual receptor T lymphocytes in the pathogenesis of Kawasaki disease and during IVIG treatment. name mentioned* literature_supp
39472557 Physiological and pathogenic T cell autoreactivity converge in type 1 diabetes. name mentioned* literature_supp
40664667 High-resolution mapping of single cells in spatial context. name mentioned* literature_supp
40866291 Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/DOG-V4IXRB2X2/similar?min_identity=0.95&kind=nt.