AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

DOG-VB4FQWEMO

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2021-12-27 → 2024-01-07 SpeciesCanis lupus LocusIGK TypeV FunctionalNone Length281 nt RecordSuperseded

a Canis lupus IGK V allele sequence, 281 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. IGKV8-22*01 is still published by IMGT as DOG-VQCTYPPI7, 279 nt, a shorter cut contained in this sequence. This is the earlier record (281 nt, current in IMGT releases 2021-12-27–2024-01-07). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesCanis lupus (NCBITAXON:9612)
Locus / typeIGK / V
Functional iNone
Length281 nt
Protein UID iDOG-VP-4CLGFE (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

281 nt
CACGCTGGGCTGACCCGGTGCCGGCTCCCCTCTGCGTCCCTGAGACACAGCGTGTCCGTCACCTGCAGGCCCAGTAGAGCATCAGCGATCACTTCAGCTGGTATCCGCAGAAACCAGGCCGGGCTCCTGAGCTTCGCATCTGTGATACTAGTAACCGAAAGCCTGGAGTCCCACAGGTTCTCCGCGAGTCAGCTGGACACCGAATTCATCCTCAGAATCAGCACGGTGGGGGCTGAGGGTCCTGCCAGTTATCACTGCCCCGGGAGTATACACTGCCCCCC

Amino-acid sequence (V-REGION)

93 aa
HAGLTRCRLPSASLRHSVSVTCRPSRASAITSAGIRRNQAGLLSFASVILVTESLESHRFSASQLDTEFILRISTVGAEGPASYHCPGSIHCP

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2021-12-27; formerly IGKV8-22*01 (to 2021-12-27); superseded by IGKV8-22*01 (279 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
IGKV8-22*012021-12-27

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/DOG-VB4FQWEMO/similar?min_identity=0.95&kind=nt.