AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

DOG-VZ4VOVV3S

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesCanis lupus LocusIGK TypeV FunctionalNone Length302 nt

IGKV2-13*02: a Canis lupus IGK V allele sequence, 302 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesCanis lupus (NCBITAXON:9612)
Locus / typeIGK / V
Functional iNone
Length302 nt
Protein UID iDOG-VP-WMSD7Q (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

302 nt
GATATCGTCATGACACAGACCCCACTGTCCGTGTCTGTCAGCCCTGGAGAGACGGCCTCCATCTCCTGCAGGGCCAGTCAGAGCCTCCTGCACAGTGATGGAAACACCTATTTGGATTGGTACCTGCAGAAGCCAGGCCAGATTCCAAAGGACCTGATCTATAGGGTGTCCAACTGCTTCACTGGGGTGTCAGACAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACCCTGAGAATCAGCAGAGTGGAGGCTGACAACGCTGGAGTTTATTACTGCATGCAAGGTATACAAGATCCTCC

Amino-acid sequence (V-REGION)

100 aa
DIVMTQTPLSVSVSPGETASISCRASQSLLHSDGNTYLDWYLQKPGQIPKDLIYRVSNCFTGVSDRFSGSGSGTDFTLRISRVEADNAGVYYCMQGIQDP

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (DOG-VZ4VOVV3S). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-13*02 IMGT IMGT

External records i

IMGT: IGKV2-13*02

Literature references 3 total · 3 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
38649520 Single-cell T-cell receptor repertoire profiling in dogs. name mentioned* literature_supp
41021799 Molecular divergence and convergence of mammalian antibody responses to the influenza virus hemagglutinin stem. name mentioned* literature_supp
41941497 Pigs lacking Natural Killer T cells have altered cellular responses to influenza. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/DOG-VZ4VOVV3S/similar?min_identity=0.95&kind=nt.