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DOG-VZD67KF56

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2016-12-19 SpeciesCanis lupus LocusIGH TypeV FunctionalNone Length295 nt RecordSuperseded

a Canis lupus IGH V allele sequence, 295 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. IGHV3-40*01 is still published by IMGT as DOG-VDLMHFXBO, 296 nt, which contains this sequence. This is the earlier record (295 nt, current in IMGT releases 2016-12-19). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesCanis lupus (NCBITAXON:9612)
Locus / typeIGH / V
Functional iNone
Length295 nt
Protein UID iDOG-VP-LNXVBP (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

295 nt
TGCAATGGGTCCGTCAGGCTCCTGGGAAGGGGGTGCAGTGGGTCGCATACATTAACAGTGGTGGAAGTAGCACAAGCTTCGCAGATGCTGTGAAGGGCATGAGCTGGTTTCGCCAGGCTCCAGGGAAGGGGCTGCAATGGGTTACATGGATTGGGTATGATGGAAGTAGCACATACTACACAGACACTGTAAAGGGCCGATTCACTATCTCCATAGACAACGCCAAGAACATGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACATAGCCCTGTATTACTGTGCGAGGGA

Amino-acid sequence (V-REGION)

97 aa
QWVRQAPGKGVQWVAYINSGGSSTSFADAVKGMSWFRQAPGKGLQWVTWIGYDGSSTYYTDTVKGRFTISIDNAKNMLYLQMNSLRAEDIALYYCAR

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2016-12-19; formerly IGHV3-40*01 (to 2016-12-19); superseded by IGHV3-40*01 (296 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
IGHV3-40*012016-12-19

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/DOG-VZD67KF56/similar?min_identity=0.95&kind=nt.