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FERRET-VBBQZMFTZ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMustela putorius LocusIGH TypeV FunctionalNone Length295 nt

IGHV3-41*01: a Mustela putorius IGH V allele sequence, 295 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMustela putorius (NCBITAXON:9668)
Locus / typeIGH / V
Functional iNone
Length295 nt
Protein UID iFERRET-VP-4ZEPZO (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

295 nt
GAGGTGCAGCTGGTGGAGTCTGGGGGAGACCTAGTAAAGCCTGGGGGTCCCTGAGACTCTCCTGCGCAGCCTCTGGATTTACCTTCAGTAGCTACGGCATGAGCTGGGTCAGCCAGGCTCCAAGGAAGGGGCTGCAGTGGGTCGCATATATTAGCTATGATGGAAGTAGCACAAACTATGCAGACTCTGTGAAGGGCGAGTTCACCATCTCCAGAGACAATGACAAAAACATGCTGTATCTGCAGATGAACAGGCTCAGAGCCCTGGACACAGCCCTGTATTACTGTGCAAGAGA

Amino-acid sequence (V-REGION)

97 aa
GAAGGVWGRPSKAWGSLRLSCAASGFTFSSYGMSWVSQAPRKGLQWVAYISYDGSSTNYADSVKGEFTISRDNDKNMLYLQMNRLRALDTALYYCAR

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (FERRET-VBBQZMFTZ). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV3-41*01 IMGT IMGT

External records i

IMGT: IGHV3-41*01

Literature references 4 total · 1 sequence-in-paper · 3 name-mentioned* i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
40116504 Development of ferret immune repertoire reference resources and single-cell-based high-throughput profiling assays. sequence in paper literature_supp
36328595 Myeloma immunoglobulin rearrangement and translocation detection through targeted capture sequencing. name mentioned* literature_supp
38961347 Systematic characterization of immunoglobulin loci and deep sequencing of the expressed repertoire in the Atlantic cod (Gadus morhua). name mentioned* literature_supp
41876881 Development of canine parvovirus-neutralizing monoclonal antibodies from natural host and their germline gene usage. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/FERRET-VBBQZMFTZ/similar?min_identity=0.95&kind=nt.