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FERRET-VGVN4YQS5

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMustela putorius LocusTRB TypeV FunctionalNone Length287 nt

TRBV23*01: a Mustela putorius TRB V allele sequence, 287 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMustela putorius (NCBITAXON:9668)
Locus / typeTRB / V
Functional iNone
Length287 nt
Protein UID iFERRET-VP-5FVR3H (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

287 nt
GATGCCAAAGTCATGTAGACTCCAGGACATCTGGTCAAAGGCAAAGGCCAGAAGGCAAGGATGGACAGCATCCCAGAAAAGGGATATACTTTTGTTTACTGGCATCAAGACCCAGGAAAAAGAGTGGCAGTTTTTTATTTATTTTCGGAACGATCAAGTTCTTGATCAAATCATCTCACTCAAGGAGCAATTCTCAGCTTAATGGCCCCCAAACTCACCCTGCAGTCTGGAAATTCAGTCCTCTGAACCAGAAGACTTGGCACTAACTTCTGTGCCATCAGCTAATC

Amino-acid sequence (V-REGION)

95 aa
DAKVM*TPGHLVKGKGQKARMDSIPEKGYTFVYWHQDPGKRVAVFYLFSERSSS*SNHLTQGAILSLMAPKLTLQSGNSVL*TRRLGTNFCAIS*

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (FERRET-VGVN4YQS5). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRBV23*01 IMGT IMGT

External records i

IMGT: TRBV23*01

Literature references 3 total · 1 sequence-in-paper · 2 name-mentioned* i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
40116504 Development of ferret immune repertoire reference resources and single-cell-based high-throughput profiling assays. sequence in paper literature_supp
38762584 Invariant γδTCR natural killer-like effector T cells in the naked mole-rat. name mentioned* literature_supp
42129543 One-step generation of T-cell receptor knock-in mice in the TCRβ locus. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/FERRET-VGVN4YQS5/similar?min_identity=0.95&kind=nt.