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FERRET-VLOABZHG7

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMustela putorius LocusTRB TypeV FunctionalTrue Length290 nt

TRBV7-2*02: a Mustela putorius TRB V allele sequence, 290 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMustela putorius (NCBITAXON:9668)
Locus / typeTRB / V
Functional iTrue
Length290 nt
Protein UID iFERRET-VP-3COEAT (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

290 nt
GGACCCGGAGTCTCCCAGTTCCCCAGGCACAGGGTCACAGAGAGGGGCCAAAATGTAACTCTCGGGTGTGATCCCATTTCTGGTCATACTGTCCTTTATTGGTACCGACAGACCACAGGGAAAGGCCTGGAGTTTTTGGTTTACTTCCAAAACACGGATCCAGTGGACAAATCAGGGATGACCAATGATCGGTTGTCGGTCCAGAGGTCTAAGGGGACCAACTCCACTCTGCAGATCCAGCGTGCAGAGCAGGGGGACTCGGCTGTGTACCTCTGTGCCAGCAGTCCCAC

Amino-acid sequence (V-REGION)

96 aa
GPGVSQFPRHRVTERGQNVTLGCDPISGHTVLYWYRQTTGKGLEFLVYFQNTDPVDKSGMTNDRLSVQRSKGTNSTLQIQRAEQGDSAVYLCASSP

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (FERRET-VLOABZHG7). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRBV7-2*02 IMGT IMGT

External records i

IMGT: TRBV7-2*02

Literature references 21 total · 1 sequence-in-paper · 20 name-mentioned* i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
40116504 Development of ferret immune repertoire reference resources and single-cell-based high-throughput profiling assays. sequence in paper literature_supp
22792299 Unbiased analysis of TCRα/β chains at the single-cell level in human CD8+ T-cell subsets. name mentioned* literature_supp
26147596 Structure of Staphylococcal Enterotoxin E in Complex with TCR Defines the Role of TCR Loop Positioning in Superantigen Recognition. name mentioned* literature_supp
26962778 High Throughput Sequencing of T Cell Antigen Receptors Reveals a Conserved TCR Repertoire. name mentioned* literature_supp
30152754 Human T cell receptor occurrence patterns encode immune history, genetic background, and receptor specificity. name mentioned* literature_supp
31237075 Comparative analysis of CDR3 regions in paired human αβ CD8 T cells. name mentioned* literature_supp
34316355 iCAT: diagnostic assessment tool of immunological history using high-throughput T-cell receptor sequencing. name mentioned* literature_supp
34991709 T cell receptor beta germline variability is revealed by inference from repertoire data. name mentioned* literature_supp
36408799 SARS-CoV-2-specific CD4+ and CD8+ T cell responses can originate from cross-reactive CMV-specific T cells. name mentioned* literature_supp
36923729 Cross-reactivity influences changes in human influenza A virus and Epstein Barr virus specific CD8 memory T cell receptor alpha and beta repertoires between young and old. name mentioned* literature_supp
37468623 A common allele of HLA is associated with asymptomatic SARS-CoV-2 infection. name mentioned* literature_supp
38615042 Deep learning predictions of TCR-epitope interactions reveal epitope-specific chains in dual alpha T cells. name mentioned* literature_supp
38871688 Germline-like TCR-α chains shared between autoreactive T cells in blood and pancreas. name mentioned* literature_supp
39421738 scRNA+TCR-seq reveals the pivotal role of dual receptor T lymphocytes in the pathogenesis of Kawasaki disease and during IVIG treatment. name mentioned* literature_supp
39472557 Physiological and pathogenic T cell autoreactivity converge in type 1 diabetes. name mentioned* literature_supp
39507623 Development and characterization of human T-cell receptor (TCR) alpha and beta clones' library as biological standards and resources for TCR sequencing and engineering. name mentioned* literature_supp
40664667 High-resolution mapping of single cells in spatial context. name mentioned* literature_supp
40877317 Molecular basis of potent antiviral HLA-C-restricted CD8+ T cell response to an immunodominant SARS-CoV-2 nucleocapsid epitope. name mentioned* literature_supp
41306962 Promiscuous class II-binding SARS-CoV-2-nuc derived vaccine-peptide induced extensive conventional, innate and unconventional T cell responses. name mentioned* literature_supp
41766885 Correction: Promiscuous class II-binding SARS-CoV-2-nuc derived vaccine-peptide induced extensive conventional, innate and unconventional T cell responses. name mentioned* literature_supp
42125653 N-terminal pyroglutamylation of an HLA-A24-restricted immunodominant epitope enhances SARS-CoV-2-specific T-cell responses. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/FERRET-VLOABZHG7/similar?min_identity=0.95&kind=nt.