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GORILLA-V7DR5IHX4

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesGorilla gorilla LocusTRA TypeV FunctionalTrue Length284 nt

TRAV8-2*02: a Gorilla gorilla TRA V allele sequence, 284 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesGorilla gorilla (NCBITAXON:9593)
Locus / typeTRA / V
Functional iTrue
Length284 nt
Protein UID iGORILLA-VP-HRZ5BK (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

284 nt
GCCCAGTCTGTGACCCAGCTTGACAGCCACGTCTCTGTCTCTGAAGGAACCCCGGTGCTGCTGAGGTGCAACTACTCATCGTCTTATTCACCGTCTCTCTTCTGGTATGTGCAACACCCCAACAAAGGACTCCAGCTTCTTCTGAAGTACACATCAAGGGCCACCCTGGTTAAAGGCATCAACGGTTTTGAGGCTGAATTTAAGAAGAGTGAAACCTCCTTCCACCTGACGAAACCCTCAGCCCATGTGAGCGACGCGGCTGAGTACTTCTGTGCTGTGAGTGA

Amino-acid sequence (V-REGION)

94 aa
AQSVTQLDSHVSVSEGTPVLLRCNYSSSYSPSLFWYVQHPNKGLQLLLKYTSRATLVKGINGFEAEFKKSETSFHLTKPSAHVSDAAEYFCAVS

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (GORILLA-V7DR5IHX4). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAV8-2*02 IMGT IMGT

External records i

IMGT: TRAV8-2*02

Literature references 5 total · 1 sequence-in-paper · 4 name-mentioned* i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
40205052 Complete sequencing of ape genomes. sequence in paper literature_supp
22792299 Unbiased analysis of TCRα/β chains at the single-cell level in human CD8+ T-cell subsets. name mentioned* literature_supp
27460926 Single-cell TCRseq: paired recovery of entire T-cell alpha and beta chain transcripts in T-cell receptors from single-cell RNAseq. name mentioned* literature_supp
31237075 Comparative analysis of CDR3 regions in paired human αβ CD8 T cells. name mentioned* literature_supp
39472557 Physiological and pathogenic T cell autoreactivity converge in type 1 diabetes. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/GORILLA-V7DR5IHX4/similar?min_identity=0.95&kind=nt.