AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

GORILLA-VPTYZ7U3W

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesGorilla gorilla LocusIGK TypeV FunctionalNone Length297 nt

IGKV2-29*01: a Gorilla gorilla IGK V allele sequence, 297 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesGorilla gorilla (NCBITAXON:9593)
Locus / typeIGK / V
Functional iNone
Length297 nt
Protein UID iGORILLA-VP-GTUPD2 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

297 nt
GATATTGTGATGACCCAGACTCCATCTCCCTGCCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCCTGATCTATGAGGTTTCCAACCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAACTGTACAGTTCCTCC

Amino-acid sequence (V-REGION)

99 aa
DIVMTQTPSPCPSPLDSRPPSPASLVRASCIVMERLFVLVPAEARPVSTAPDL*GFQPGLWSPRQVQWQWVRH*FHTEISRVEAEDVGVYYCMQLYSSS

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (GORILLA-VPTYZ7U3W). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-29*01 IMGT IMGT

External records i

IMGT: IGKV2-29*01

Literature references 5 total · 5 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
29558968 BALDR: a computational pipeline for paired heavy and light chain immunoglobulin reconstruction in single-cell RNA-seq data. name mentioned* literature_supp
31839985 More than one antibody of individual B cells revealed by single-cell immune profiling. name mentioned* literature_supp
36328595 Myeloma immunoglobulin rearrangement and translocation detection through targeted capture sequencing. name mentioned* literature_supp
37368240 Memory B cell development elicited by mRNA booster vaccinations in the elderly. name mentioned* literature_supp
40664667 High-resolution mapping of single cells in spatial context. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/GORILLA-VPTYZ7U3W/similar?min_identity=0.95&kind=nt.