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GRASSCARP-CCAOLU6NB

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesCtenopharyngodon idella LocusIGH TypeC FunctionalTrue Length1302 nt

IGHT3*01: a Ctenopharyngodon idella IGH C allele sequence, 1302 nt, functional. The nucleotide sequence is below, with every recorded name and its source.

SpeciesCtenopharyngodon idella (NCBITAXON:7959)
Locus / typeIGH / C
Functional iTrue
Length1302 nt · contains ambiguity

Coding sequence (nt)

IMGT publishes this constant region as separate domain records, not as one sequence. What is shown here is those domains concatenated in domain order: CH1:303 + CH2:327 + CH3:315 + CH4:318 + CHS:39, which is the secreted form. The membrane-bound form uses different 3' exons and is a separate transcript, not represented here.

1302 nt c_secreted
NCTGAACCATCTCCGCCGAAGTCAATCTTCGGCCTGTCTCAGTGTTCTTCTGATTCTGAGTTCCTCACCATCGGCTGCGTGTCAAGAGGTTTCTCCCCCGCGGACTTTCTTACTTTCAAATGGACGGATCCCGCTAAGAAAGAGGTGACTGATTTCGTGCAGTATCCAGCGTTCGGGAGTGAAGGAGACTATACCAAAATCAGCCATCTGCGTGTGAAAAAAAGCGACTGGAATCCTCAAACCTCTTACACATGTGAAGCTTCAAATTCGAAAGACAAAAAAGAAGTTATTATACCTCGACCAGCCTCACCGCCAGATCAGCCTGCAACTGTCTACTTAACAGTACCTACACAAAAGGATTTAGAAACTGGAACAGCAACCTTCTTGTGTTTAGCCCAGCAGTTTTCACCTAAAACATATTCGTTTAAGTGGTTTAAGGATGAAACGCAGTTGACAAAGTTGACACATTCGATAAACACCTATGACGCAAGTGAGAAGAATGGCTCAGTAACCTTATATAGCGCCACAAGCATTTTGCAAATCAGTGCCGGAGAATGGAAGACAGCCGCCAAAATCAAGTGCGAGTTCGAGCACAAGACGGGAAAAGAAGTCAGAGAGGCCGAATATACAGATAATTTATCCTTAGTAGATAAATTAACACTGACACTGAAGCCACCAATTGAAAAAGAACTATTTCTCAATAATAAAGTTGTCTTGCAAGCTGTTGTTTCTGGAGATGCAAAAAAAGTGACAGAAGCTTCAGTGTCATGCACAGTGAATAATGACCGGGTGGATCCTAGAAGTTTCAACGTTTCTCAGGACAATTCACAGAATATTAAAATCCACAAATTCATAGTTGATACAAATAAATGGTTTGATGGTGAAACTGTCACCTGCACCATCAACGACGGACACATCAAGCAGGAAATCCATTGTAATAAAGGAGATGAAAAGACACCCAATGTTACCATTTACAGACCTGATAGTAACAACGACACAAATCATGTCTCTCTGGTGTGTGAGGTCACAAGCCCTAAACTTGGCGATGTCTATATCATGTGGAAAGTGAGAGAAAAGCCTTACGAAGAGGCCATAACCAGTCTTCCTATTCATCAAAAGAGCTCCACATCGGTTGTCAGCATCCTAACAGTGTCAAAACAAGAGTATGAGGACCCCGGAACCACCATCACCTGCGCAGTTAAACATGCCAAGAAGGGGAATTTAAGCGCTCCATTACAAGTTTCAACAAGCCAAAGTAAACAATGTCCAGAATGTCCAGTTTGTAACAAAGATTATGCATGC

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (GRASSCARP-CCAOLU6NB). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHT3*01 IMGT IMGT

External records i

IMGT: IGHT3*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/GRASSCARP-CCAOLU6NB/similar?min_identity=0.95&kind=nt.