HORSE-VZXKRQL3C

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesEquus caballus LocusIGH TypeV FunctionalNone Length294 nt

IGHV4-57*01: a Equus caballus IGH V allele sequence, 294 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Equus caballus (NCBITAXON:9796)
Locus / type	IGH / V
Functional i	None
Length	294 nt
Protein UID i	HORSE-VP-X6HP5R (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

294 nt

CAGGTGCAGCTGCAGAAGTTGAGCCCAGGATTGGTGAAGACCTCACAGACCATCTCATTCAACTGTCCTGTCTATGGATTCTCCATCACCAGTGGTTATGAATGGATGAGGATTTGTCAGTCCCCAGGGAAGGGCTTTGAGTAGATGAGGTACATAAATGCTGCTGGTAGCACAGCATACAATCCATCCCTCAAGAGCTGCATCTTTATCTCGAGAAACTCATCCAAGAACAAGTTCTCCCTGAAGCTGAGCTCCATGACTGTTAAGGAGAGAGCCACGTATTACTATTCAAGA

Amino-acid sequence (V-REGION)

98 aa

QVQLQKLSPGLVKTSQTISFNCPVYGFSITSGYEWMRICQSPGKGFE*MRYINAAGSTAYNPSLKSCIFISRNSSKNKFSLKLSSMTVKERATYYYSR

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: formerly IGHV4-68*01 (to 2020-01-31);

Allele names i

Every name below denotes this exact sequence (HORSE-VZXKRQL3C). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGHV4-57*01	IMGT	IMGT

Former IMGT names i

Former name	Last seen in IMGT release
*IGHV4-6801**	2020-01-31

External records i

IMGT: IGHV4-57*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACTCAAACC	IMGT	HORSE-RWS3GT

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGACTCTGCCACTGCCCTTGCCTTCCTCCTGGCTGTTCTCCCAGTCAGTGTCCTGTCT	49 + 11 nt	IMGT	HORSE-LH46H6

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HORSE-VZXKRQL3C/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases