HUMAN-JFJTIIC7T
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHJ6*01: a Homo sapiens IGH J allele sequence, 63 nt, functional. The nucleotide sequence is below, with every recorded name and its source.
| Species | Homo sapiens (NCBITAXON:9606) |
|---|---|
| Locus / type | IGH / J |
| Functional i | True |
| Length | 63 nt |
Coding sequence (nt)
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (HUMAN-JFJTIIC7T). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHJ6*01 | IMGT | IMGT |
External records i
GenBank: GENBANK:J00256 IMGT: IGHJ6*01
Literature references i
PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.
| PMID | Title | Evidence | Source |
|---|---|---|---|
| 34484220 | RAPID: A Rep-Seq Dataset Analysis Platform With an Integrated Antibody Database. | sequence in paper | literature_supp |
| 34764956 | Novel Allele Detection Tool Benchmark and Application With Antibody Repertoire Sequencing Dataset. | sequence in paper | literature_supp |
| 36159868 | Profiling genes encoding the adaptive immune receptor repertoire with gAIRR Suite. | sequence in paper | literature_supp |
Contributed by IMGT. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| j_rs | GGTTTTTGTGGGGTGAGGATGGACATTCTGCCATTGTG | IMGT | HUMAN-RQHOHM |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/HUMAN-JFJTIIC7T/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases