AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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HUMAN-JXZOTVUJP

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesHomo sapiens LocusIGL TypeJ FunctionalTrue Length38 nt

IGLJ2*01, IGLJ2A*01, IGLJ3*01: a Homo sapiens IGL J allele sequence, 38 nt, functional. The nucleotide sequence is below, with every recorded name and its source.

SpeciesHomo sapiens (NCBITAXON:9606)
Locus / typeIGL / J
Functional iTrue
Length38 nt

Coding sequence (nt)

38 nt
TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (HUMAN-JXZOTVUJP). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 3 different allele designations: IGLJ2*01, IGLJ2A*01, IGLJ3*01. These are identical normalized nucleotide sequences with different attributed names.

NameSchemeSource(s)
IGLJ2*01 IMGT IMGT, OGRDB
IGLJ2A*01 IMGT IMGT
IGLJ3*01 IMGT IMGT

External records i

GenBank: GENBANK:IMGT000293 GenBank: GENBANK:M15641 GenBank: GENBANK:M15642 IMGT: IGLJ2*01 OGRDB: IGLJ2*01

Contributed by IMGT, OGRDB. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
j_rsGGTTTTTGTATGAGCCTGTGTCACAGTG IMGT HUMAN-R5VBTJ

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-JXZOTVUJP/similar?min_identity=0.95&kind=nt.