AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

HUMAN-V5D5JCU4Y

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesHomo sapiens LocusIGK TypeV FunctionalFalse Length299 nt

IGKV7-3*03: a Homo sapiens IGK V allele sequence, 299 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesHomo sapiens (NCBITAXON:9606)
Locus / typeIGK / V
Functional iFalse
Length299 nt
Protein UID iHUMAN-VP-BYCDKG (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

299 nt
GACATTGTGCTGACCCAGTCTCCAGCCTCCTTGGCCGTGTCTCCAGGACAGAGGGCCACCATCACCTGCAGAGCCAGTGAGAGTGTCAGTTTCTTGGGAATAAACTTAATTCACTGGTATCAGCAGAAACCAGGACAACCTCCTAAACTCCTGATTTACCAAGCATCCAATAAAGACACTGGGGTCCCAGCCAGGTTCAGCGGCAGTGGGTCTGGGACCCATTTCACCCTCACAATTAATCCTGTGGAAGCTAATGATACTGCAAATTATTACTGTCTGCAGAGTAAGAATTTTCCTCC

Amino-acid sequence (V-REGION)

99 aa
DIVLTQSPASLAVSPGQRATITCRASESVSFLGINLIHWYQQKPGQPPKLLIYQASNKDTGVPARFSGSGSGTHFTLTINPVEANDTANYYCLQSKNFP

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (HUMAN-V5D5JCU4Y). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV7-3*03 IMGT IMGT

External records i

GenBank: GENBANK:IMGT000273 IMGT: IGKV7-3*03

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGCTTTAGGTCTAAACAAAAACC IMGT HUMAN-RK7LKU

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATAGGGTCCGGGGCTCCTTTGCTGTGGATCCTCCTGCTCTGGGCTCCAAGCTGCAATGGG 49 + 11 nt IMGT HUMAN-LCID4U

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-V5D5JCU4Y/similar?min_identity=0.95&kind=nt.