AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

HUMAN-V6BPUMNRZ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesHomo sapiens LocusTRB TypeV FunctionalNone Length260 nt

TRBV7-4*02: a Homo sapiens TRB V allele sequence, 260 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesHomo sapiens (NCBITAXON:9606)
Locus / typeTRB / V
Functional iNone
Length260 nt
Protein UID iHUMAN-VP-2GUBPA (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

260 nt
GGTGCTGGAGTCTCCCAGTCCCCAAGGTACAAAGTCGCAAAGAGGGGACGGGATGTAGCTCTCAGGTGTGATTCAATTTCGGGTCATGTAACCCTTTATTGGTACCGACAGACCCTGGGGCAGGGCTCAGAGGTTCTGACTTACTCCCAGAGTGATGCTCAACGAGACAAATCAGGGCGGCCCAGTGGTCGGTTCTCTGCAGAGAGGCCTGAGAGATCGTCTCCACTCCGAAGATCCAGCGCACAGAGCAGGGGGACTCA

Amino-acid sequence (V-REGION)

86 aa
GAGVSQSPRYKVAKRGRDVALRCDSISGHVTLYWYRQTLGQGSEVLTYSQSDAQRDKSGRPSGRFSAERPERSSPLRRSSAQSRGT

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (HUMAN-V6BPUMNRZ). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRBV7-4*02 IMGT IMGT

External records i

IMGT: TRBV7-4*02

Literature references 1 total · 1 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
40186144 scTCR-seq and HTS reveal a special novel TRBD2-TRBJ1 rearrangement in mammalian TRB CDR3 repertoire. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
TCCTGGGTTTCCTAGGGACAGATCACACA 21 + 8 nt IMGT HUMAN-LWL3NG

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-V6BPUMNRZ/similar?min_identity=0.95&kind=nt.