AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

HUMAN-VLTYK4YQ3

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesHomo sapiens LocusIGH TypeV FunctionalNone Length301 nt

IGHV3-36*02: a Homo sapiens IGH V allele sequence, 301 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesHomo sapiens (NCBITAXON:9606)
Locus / typeIGH / V
Functional iNone
Length301 nt
Protein UID iHUMAN-VP-RNBYW5 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

301 nt
GAGGTGCAGCTGGTGGAGTCTTTGGGAGGCTTGTTATAGCCTGGGGGTCCCTGAGACTTTCTTTTGCAGCCTCTGGATTCACCTTTAGTACCTTTATTAGGTACTGGATGAGCTGGGTCCATCAGGCTCCTGGGAAAGGGCTGGAGTAGGTCTCATTTATGAGTTGTTGTGTAGGTAGCACAAGCTATGCAGACTCTGTGAAGGGTCGATTCACCCTCTCCAGAGATGATGCCAAGAAATCACTGTATCTGCAAATGAACAGCGTCAGAGCCGAGGATAGGTCTGTGTATTACTGTGGTGG

Amino-acid sequence (V-REGION)

100 aa
EVQLVESLGGLL*PGGP*DFLLQPLDSPLVPLLGTG*AGSIRLLGKGWSRSHL*VVV*VAQAMQTL*RVDSPSPEMMPRNHCICK*TASEPRIGLCITVV

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (HUMAN-VLTYK4YQ3). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV3-36*02 IMGT IMGT

External records i

IMGT: IGHV3-36*02

Literature references 1 total · 1 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMIDTitleEvidenceSource
34764956 Novel Allele Detection Tool Benchmark and Application With Antibody Repertoire Sequencing Dataset. sequence in paper literature_supp

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTAATGTAAAAGGTGTCCAGTGT 46 + 11 nt IMGT HUMAN-L63TQN

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-VLTYK4YQ3/similar?min_identity=0.95&kind=nt.