AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

HUMAN-VOSLORND2

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2013-01-20 SpeciesHomo sapiens LocusTRB TypeV FunctionalNone Length258 nt RecordSuperseded

a Homo sapiens TRB V allele sequence, 258 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. TRBV4-1*02 is still published by IMGT as HUMAN-VRZ4YVYDS, 259 nt, which contains this sequence. This is the earlier record (258 nt, current in IMGT releases 2013-01-20). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesHomo sapiens (NCBITAXON:9606)
Locus / typeTRB / V
Functional iNone
Length258 nt
Protein UID iHUMAN-VP-QOHM4J (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

258 nt
CACCTGGTCATGGGAATGACAAATAAGAAGTCTTTGAAATGTGAACAACATATGGGGCACAGGGCAATGTATTGGTACAAGCAGAAAGCTAAGAAGCCACCGGAGCTCATGTTTGTCTACAGCTATGAGAAACTCTCTATAAATGAAAGTGTGCCAAGTCGCTTCTCACCTGAATGCCCCAACAGCTCTCTCTTAAACCTTCACCTACACGCCCTGCAGCCAGAAGACTCAGCCCTGTATCTCTGCGCCAGCAGCCAA

Amino-acid sequence (V-REGION)

86 aa
HLVMGMTNKKSLKCEQHMGHRAMYWYKQKAKKPPELMFVYSYEKLSINESVPSRFSPECPNSSLLNLHLHALQPEDSALYLCASSQ

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2013-01-20; formerly TRBV4-1*02 (to 2013-01-20); superseded by TRBV4-1*02 (259 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
TRBV4-1*022013-01-20

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-VOSLORND2/similar?min_identity=0.95&kind=nt.